Start with this. Let me know what you're finding, any questions, and if you want me to continue. There's a discrepancy between this chart and the wiring diagram (in the same manual), w/ regards to cdi inputs. I need to figure it out before I send more.
Below is an image of the starting circuit for the yfm600 98-01. Battery (2) is at top, (1) is main fuse, from which hot is sent to the main (key) switch (A). From what you've said, your fuse is okay, but you could verify.
Below the battery is (3) starter relay, (4) starter, and (6) start button. Diagnosis of the starter relay, and starter circuit cut-off relay (SCCR), is described above. Your starter is cranking, so we don't need to go into that. To verify function of the start button, follow the wiring to the opaque six pin connector with R/W (red/white) and B (black) wires at the corners on the lock side. You should have continuity between the two pins when start button is pressed, open line when not. The B (black) wire brings ground into the switch and the R/W sends it out to the starter relay. Verify at the connector that the black wire coming in has continuity w/ a good ground (frame or block). Verify also that you have continuity from the R/W (red/white) that leaves the start switch connector and the same color wire at the starter relay connector. Make sure you're on the correct side of the connector when you check these. If your start button works properly, you have a good ground into the switch, and continuity from the switch to the starter relay, then the starter relay is getting ground, but not hot.
The starter relay gets it's hot through the L/W (blue/white) wire from the starter circuit cut-off relay (5). When the SCCR is engaged, it sends a hot that comes from the main switch (Br) to the starter relay on a L/W (blue/white) wire. The Br (brown) wire from the main switch also provides the hot to activate the SCCR. The ground side of the relay comes from the cdi.
For now, verify you're getting hot to the SCCR from the main switch along the Br (brown) wire (remember there are two brown leads in, one to activate the SCCR and the other to provide the upstream side of the relay). Remove the SCCR from the connector, turn the key on, and check for 12v dc between the two Br (brown) wires at the back of the connector to the SCCR (from the main switch) and a good ground (frame or block).
The ground line needed to complete the circuit and engage the SCCR comes in on a Y/B (yellow/blue) wire from the cdi (7), based on inputs that show below the cdi on this chart. It's complicated, and as I had stated, there's a discrepancy between this chart and the wiring diagrams. Will send more as quickly as I can get through it. We have snow, high winds, and very cold temps forecast the next 3 or 4 days, so it may be a few days. I'll do the best I can.
Below is an image of the starting circuit for the yfm600 98-01. Battery (2) is at top, (1) is main fuse, from which hot is sent to the main (key) switch (A). From what you've said, your fuse is okay, but you could verify.
Below the battery is (3) starter relay, (4) starter, and (6) start button. Diagnosis of the starter relay, and starter circuit cut-off relay (SCCR), is described above. Your starter is cranking, so we don't need to go into that. To verify function of the start button, follow the wiring to the opaque six pin connector with R/W (red/white) and B (black) wires at the corners on the lock side. You should have continuity between the two pins when start button is pressed, open line when not. The B (black) wire brings ground into the switch and the R/W sends it out to the starter relay. Verify at the connector that the black wire coming in has continuity w/ a good ground (frame or block). Verify also that you have continuity from the R/W (red/white) that leaves the start switch connector and the same color wire at the starter relay connector. Make sure you're on the correct side of the connector when you check these. If your start button works properly, you have a good ground into the switch, and continuity from the switch to the starter relay, then the starter relay is getting ground, but not hot.
The starter relay gets it's hot through the L/W (blue/white) wire from the starter circuit cut-off relay (5). When the SCCR is engaged, it sends a hot that comes from the main switch (Br) to the starter relay on a L/W (blue/white) wire. The Br (brown) wire from the main switch also provides the hot to activate the SCCR. The ground side of the relay comes from the cdi.
For now, verify you're getting hot to the SCCR from the main switch along the Br (brown) wire (remember there are two brown leads in, one to activate the SCCR and the other to provide the upstream side of the relay). Remove the SCCR from the connector, turn the key on, and check for 12v dc between the two Br (brown) wires at the back of the connector to the SCCR (from the main switch) and a good ground (frame or block).
The ground line needed to complete the circuit and engage the SCCR comes in on a Y/B (yellow/blue) wire from the cdi (7), based on inputs that show below the cdi on this chart. It's complicated, and as I had stated, there's a discrepancy between this chart and the wiring diagrams. Will send more as quickly as I can get through it. We have snow, high winds, and very cold temps forecast the next 3 or 4 days, so it may be a few days. I'll do the best I can.